HCV NS5 Genotype-5

Hepatitis C Virus NS5 Genotype-5 Recombinant
Cat. No.
BT17009
Source
Synonyms
Appearance
Purity
HCV NS5 Genotype-5 protein is >95% pure as determined by 10% PAGE (coomassie staining).
Usage
THE BioTek's products are furnished for LABORATORY RESEARCH USE ONLY. The product may not be used as drugs, agricultural or pesticidal products, food additives or household chemicals.
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Description

The E.coli derived recombinant protein contains the HCV NS5 Genotype 5 immunodominant regions, amino acids 2212-2313.

Product Specs

Introduction
Hepatitis C virus (HCV) is a small (50 nm), enveloped, single-stranded, positive-sense RNA virus belonging to the Flaviviridae family. It exhibits a high replication rate, producing approximately one trillion particles daily in an infected individual. The absence of proofreading mechanisms in the HCV RNA polymerase results in a notably high mutation rate, potentially contributing to its ability to evade the host's immune response. HCV is classified into six genotypes (1-6), each with multiple subtypes, exhibiting varying global prevalence and distribution. Genotype determination is clinically crucial as it influences the potential response to interferon-based therapy and the required treatment duration. Notably, genotypes 1 and 4 demonstrate lower responsiveness to interferon-based treatment compared to genotypes 2, 3, 5, and 6.
Description
This recombinant protein, derived from E. coli, encompasses the immunodominant regions of the HCV NS5 protein from genotype 5, specifically amino acids 2212 to 2313.
Purity
The purity of the HCV NS5 Genotype-5 protein exceeds 95%, as determined by 10% SDS-PAGE analysis with Coomassie blue staining.
Formulation
The protein is supplied in a buffer containing 1.5 M urea, 25 mM Tris-HCl (pH 8.0), 0.2% Triton X-100, and 50% glycerol.
Stability
HCV NS5 Genotype-5, while stable at 4°C for up to 1 week, is best stored at or below -18°C. Repeated freezing and thawing should be avoided.
Applications
The HCV NS5 Genotype-5 antigen is suitable for use in ELISA and Western blotting applications. Its high specificity makes it an excellent antigen for the detection of HCV.
Purification Method
HCV NS5 Genotype-5 protein was purified by proprietary chromatographic technique.
Specificity
Immunoreactive with sera of HCV-infected individuals.

Product Science Overview

Introduction

Hepatitis C Virus (HCV) is a significant global health concern, affecting millions of people worldwide. The virus is known for its genetic diversity, which is categorized into seven major genotypes and numerous subtypes. Among these, genotype 5 is relatively less common and is predominantly found in Southern Africa. The nonstructural protein 5 (NS5) of HCV plays a crucial role in the viral replication process and is a target for antiviral therapies.

Hepatitis C Virus Structure and Genome

HCV is an enveloped, positive-sense single-stranded RNA virus. Its genome is approximately 9.6 kilobases in length and encodes a single polyprotein, which is processed into structural and nonstructural proteins. The structural proteins include the core protein and envelope glycoproteins E1 and E2. The nonstructural proteins, which are essential for viral replication, include p7, NS2, NS3, NS4A, NS4B, NS5A, and NS5B .

NS5 Protein

The NS5 protein is divided into two distinct regions: NS5A and NS5B. NS5A is a multifunctional phosphoprotein involved in viral replication, modulation of the host cell environment, and interaction with host immune responses. NS5B is an RNA-dependent RNA polymerase responsible for the replication of the viral RNA genome .

Genotype 5

Genotype 5 of HCV is less prevalent compared to other genotypes such as 1, 2, and 3. It is mainly found in Southern Africa, with sporadic cases reported in other regions. The genetic variability of HCV, including genotype 5, poses challenges for treatment and vaccine development. Genotype-specific differences can influence the response to antiviral therapies, making genotyping an essential tool for the clinical management of HCV infection .

Recombinant Forms

Recombinant forms of HCV arise when two different genotypes or subtypes of the virus exchange genetic material. These recombinant viruses can exhibit unique properties and may pose additional challenges for diagnosis and treatment. Recombinant forms involving genotype 5 have been reported, although they are relatively rare. The identification of recombinant HCV strains requires advanced molecular techniques such as sequencing and phylogenetic analysis .

Clinical Implications

The presence of recombinant HCV strains, including those involving genotype 5, has significant clinical implications. These strains may exhibit altered pathogenicity, transmissibility, and resistance to antiviral drugs. Understanding the genetic diversity and recombinant forms of HCV is crucial for developing effective treatment strategies and improving patient outcomes .

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