Ribonuclease H1 (RNase H1) is an essential enzyme involved in the maintenance and replication of DNA. It specifically degrades the RNA strand of RNA-DNA hybrids, which are formed during various cellular processes such as DNA replication and repair. The recombinant form of RNase H1 from Escherichia coli (E. coli) is widely used in research due to its high activity and stability.
RNase H1 belongs to the RNase H family of enzymes, which are characterized by their ability to cleave the RNA strand of RNA-DNA hybrids. The enzyme consists of a single polypeptide chain with a molecular weight of approximately 18 kDa. It contains a conserved catalytic domain that is responsible for its enzymatic activity .
The primary function of RNase H1 is to remove RNA primers from Okazaki fragments during lagging strand DNA synthesis. This activity is crucial for the completion of DNA replication and the maintenance of genomic stability. Additionally, RNase H1 plays a role in the processing of R-loops, which are RNA-DNA hybrid structures that can form during transcription .
The recombinant expression of RNase H1 in E. coli involves the insertion of the RNase H1 gene into a suitable expression vector, which is then introduced into E. coli cells. The bacteria are cultured under conditions that promote the expression of the recombinant protein. The expressed protein is then purified using various chromatographic techniques to obtain a highly pure and active enzyme .
Recombinant RNase H1 from E. coli is widely used in molecular biology research. Some of its key applications include: