G/U mismatch-specific DNA glycosylase, also known as MUG (Mismatch Uracil Glycosylase), is an enzyme found in Escherichia coli (E. coli) that plays a crucial role in the base excision repair (BER) pathway. This enzyme is responsible for identifying and excising uracil and ethenocytosine from DNA, which can arise due to deamination or alkylation of cytosine, respectively .
The recombinant form of G/U mismatch-specific DNA glycosylase from E. coli is typically expressed in E. coli BL21 (DE3) cells. The enzyme consists of 168 amino acids and has a molecular weight of approximately 19 kDa . The crystal structure of this enzyme reveals a remarkable structural and functional homology to uracil DNA glycosylases (UDGs), despite low sequence identity .
The enzyme operates by hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. The complementary strand guanine plays a critical role in substrate recognition, ensuring that the enzyme specifically targets G:U and G:T mismatches .
G/U mismatch-specific DNA glycosylase is essential for maintaining genomic integrity by repairing promutagenic lesions. These lesions, if left unrepaired, can lead to mutations and genomic instability. The enzyme is particularly important in stationary-phase cells, where DNA damage repair is crucial for cell survival .
Recombinant G/U mismatch-specific DNA glycosylase from E. coli is widely used in research and biotechnology. It is employed in immunization protocols to generate antibodies that specifically target the protein of interest. The enzyme’s high sensitivity, specificity, and reproducibility make it an ideal tool for various molecular biology applications .